{"id":763,"external_id":"plugin_asdk_app_6a5fc156fad88191a3977b60131d7391","name":"app-6a5fc156fad88191a3977b60131d7391","display_name":"Tamarind Bio","developer":"Tamarind Bio","category":"Scientific Research","listing_language":"en","listing_language_details":{"method":"cld-0.13.0/listing-v1","reliable":true,"detected_at":"2026-10-01T13:21:52Z","input_sha256":"9a4895fc8daa40d9e803953ac47635f0f22d6f17dba56218975383e809079703","source_fields":["release.description","release.interface.short_description","release.interface.long_description"]},"version":"1.0.0","skill_count":14,"first_seen_at":"2026-09-30T22:02:35.000Z","last_seen_at":"2026-10-02T06:00:01.935Z","last_changed_at":"2026-09-30T22:02:35.000Z","install_count":null,"research_summary":null,"research_reviewed_at":null,"metadata":{"id":"plugin_asdk_app_6a5fc156fad88191a3977b60131d7391","name":"app-6a5fc156fad88191a3977b60131d7391","scope":"GLOBAL","status":"ENABLED","release":{"id":"pluginrel_a462dab289dc819183bb3be5cb6aa804","skills":[{"name":"tamarind-mcp-antibody","interface":{"brand_color":null,"iconography":"code","display_name":"Tamarind MCP Antibody","default_prompt":"Use $tamarind-mcp-antibody to design or analyze this antibody workflow through Tamarind MCP.","icon_large_url":null,"icon_small_url":null,"short_description":"Engineer antibodies and nanobodies through MCP"},"description":"Design, redesign, model, number, humanize, or search antibodies, nanobodies, VHHs, and TCRs with Tamarind Bio through MCP. Use for CDR-aware and repertoire-specific workflows when MCP is requested. Not for generic non-antibody binder design, ordinary complex folding, or developability scoring alone.","plugin_release_skill_id":"pluginrsk_6a66bb439fd081919a1820a29b52ec40"},{"name":"tamarind-mcp-batch","interface":{"brand_color":null,"iconography":"chart","display_name":"Tamarind MCP Batch","default_prompt":"Use $tamarind-mcp-batch to validate, estimate, submit, and monitor this multi-input batch.","icon_large_url":null,"icon_small_url":null,"short_description":"Run one Tamarind tool across many inputs"},"description":"Run one Tamarind Bio tool across many independent inputs with one MCP submitBatch call, then monitor subjobs and rank completed results. Use for libraries, screens, generated-sequence refolding, or repeated inference. Not for one input, dependent tool stages, loops of submitJob, or CLI batches.","plugin_release_skill_id":"pluginrsk_6a66bb43cdb48191b4105ef40b7358d8"},{"name":"tamarind-mcp-binder-design","interface":{"brand_color":null,"iconography":"hierarchy","display_name":"Tamarind MCP Binder Design","default_prompt":"Use $tamarind-mcp-binder-design to design and validate binder candidates for this target.","icon_large_url":null,"icon_small_url":null,"short_description":"Design and filter new binders through MCP"},"description":"Design new protein, peptide, macrocycle, or small-molecule binders against a target with Tamarind Bio through MCP, then refold and rank candidates. Use for de novo generation when MCP is requested. Not for antibody CDR engineering, fixed-backbone inverse folding, docking an existing ligand, or predicting an existing structure.","plugin_release_skill_id":"pluginrsk_6a66bb43fe8c819192c4cc3931cd8897"},{"name":"tamarind-mcp-developability","interface":{"brand_color":null,"iconography":"chart","display_name":"Tamarind MCP Developability","default_prompt":"Use $tamarind-mcp-developability to build a developability panel for these candidates.","icon_large_url":null,"icon_small_url":null,"short_description":"Filter candidates for developability through MCP"},"description":"Score protein or antibody candidates for stability, aggregation, solubility, viscosity, polyreactivity, glycosylation, immunogenicity, and related developability risks with Tamarind Bio through MCP. Use as a post-design filter. Not for generating molecules, folding structures, or measuring binding alone.","plugin_release_skill_id":"pluginrsk_6a66bb4431b481918d0b973ea0f039e3"},{"name":"tamarind-mcp-docking","interface":{"brand_color":null,"iconography":"radar","display_name":"Tamarind MCP Docking","default_prompt":"Use $tamarind-mcp-docking to choose and run the right docking or affinity workflow.","icon_large_url":null,"icon_small_url":null,"short_description":"Dock and score molecular binders through MCP"},"description":"Dock or screen known ligands against a receptor, perform protein-protein docking, or score existing poses and complexes with Tamarind Bio through MCP. Use for pocket-based or blind docking and pose ranking. Not for sequence co-folding, generating a new ligand or binder, or general structure prediction.","plugin_release_skill_id":"pluginrsk_6a66bb445ef48191adc2c3d6b9206969"},{"name":"tamarind-mcp-finetune","interface":{"brand_color":null,"iconography":"hierarchy","display_name":"Tamarind MCP Fine-tuning","default_prompt":"Use $tamarind-mcp-finetune to validate and run this supported fine-tuning workflow.","icon_large_url":null,"icon_small_url":null,"short_description":"Fine-tune and run supported models through MCP"},"description":"Fine-tune a supported Tamarind-hosted model on labeled data and run its matching inference tool through MCP. Use for live account-visible finetune/inference pairs in protein, affinity, enzyme, or small-molecule workflows. Not for stock inference, ordinary batch prediction, or unsupported custom training code.","plugin_release_skill_id":"pluginrsk_6a66bb448f9081919ef50413b3b5394b"},{"name":"tamarind-mcp-inverse-folding","interface":{"brand_color":null,"iconography":"code","display_name":"Tamarind MCP Inverse Folding","default_prompt":"Use $tamarind-mcp-inverse-folding to design sequences or run a protein language model through MCP.","icon_large_url":null,"icon_small_url":null,"short_description":"Design sequences and run protein language models"},"description":"Design sequences for a fixed protein backbone or run protein language models for embeddings, mutation scoring, likelihoods, and sequence generation with Tamarind Bio through MCP. Use for ProteinMPNN-, LigandMPNN-, ESM-IF-, or PLM-style tasks. Not for de novo backbone generation, antibody CDR design, or ordinary folding.","plugin_release_skill_id":"pluginrsk_6a66bb44bacc819189a3bd650f712bc4"},{"name":"tamarind-mcp-more-tools","interface":{"brand_color":null,"iconography":"search","display_name":"Tamarind MCP More Tools","default_prompt":"Use $tamarind-mcp-more-tools to discover and run a Tamarind tool outside the dedicated workflows.","icon_large_url":null,"icon_small_url":null,"short_description":"Use Tamarind long-tail scientific tools via MCP"},"description":"Discover and run Tamarind Bio tools outside the dedicated MCP structure, binder, antibody, docking, inverse-folding, and developability skills. Use for enzymes, small-molecule properties or QM, molecular dynamics, nucleic acids, cryo-EM, structure search, and utilities. Not for a domain with a dedicated Tamarind MCP skill.","plugin_release_skill_id":"pluginrsk_6a66bb44e84881918d8680ebe5871fd3"},{"name":"tamarind-mcp-pipeline","interface":{"brand_color":null,"iconography":"default","display_name":"Tamarind MCP Pipeline","default_prompt":"Use $tamarind-mcp-pipeline to plan and run this resumable multi-stage Tamarind campaign.","icon_large_url":null,"icon_small_url":null,"short_description":"Chain dependent Tamarind jobs through MCP"},"description":"Orchestrate multiple dependent Tamarind Bio tools as a resumable MCP campaign where successful stages feed later stages, such as design to fold to score. Use when stages depend on earlier artifacts or metrics. Not for one job, one independent batch, a nonexistent submitPipeline call, or CLI orchestration.","plugin_release_skill_id":"pluginrsk_6a66bb4514c08191ac09196d240ca138"},{"name":"tamarind-mcp-results-analysis","interface":{"brand_color":null,"iconography":"search","display_name":"Tamarind MCP Results","default_prompt":"Use $tamarind-mcp-results-analysis to recover this Tamarind job and analyze its outputs.","icon_large_url":null,"icon_small_url":null,"short_description":"Recover and analyze Tamarind MCP results"},"description":"Recover and analyze an existing Tamarind Bio job or batch through MCP by durable name, including bounded monitoring, logs, metrics, output-file inspection, cancellation, and downstream artifact selection. Use after submission or across sessions. Not for starting a new job or using the CLI.","plugin_release_skill_id":"pluginrsk_6a66bb453b3c8191aee6d3b141ceb5a7"},{"name":"tamarind-mcp-setup","interface":{"brand_color":null,"iconography":"cursor","display_name":"Tamarind MCP Setup","default_prompt":"Use $tamarind-mcp-setup to connect and verify Tamarind MCP without submitting compute.","icon_large_url":null,"icon_small_url":null,"short_description":"Connect and verify Tamarind MCP access"},"description":"Connect, authenticate, or troubleshoot the Tamarind Bio MCP server and run a no-spend connectivity check. Use when Tamarind MCP tools are missing, OAuth is incomplete or rejected, or the user wants MCP rather than the Tamarind CLI. Not for selecting a scientific model or submitting compute.","plugin_release_skill_id":"pluginrsk_6a66bb4568508191a02e226f67e9b33e"},{"name":"tamarind-mcp-structure-prediction","interface":{"brand_color":null,"iconography":"chart","display_name":"Tamarind MCP Structure Prediction","default_prompt":"Use $tamarind-mcp-structure-prediction to choose and run a structure model for this input.","icon_large_url":null,"icon_small_url":null,"short_description":"Predict biomolecular structures through MCP"},"description":"Predict or co-fold proteins, peptides, nucleic acids, ligands, or biomolecular complexes with Tamarind Bio through MCP. Use for live AlphaFold-, Boltz-, Chai-, ESMFold-, or Protenix-style structure workflows when MCP is requested. Not for de novo binder generation, antibody-specific modeling, or docking into a known pocket.","plugin_release_skill_id":"pluginrsk_6a66bb4593288191a5e5dce5da379457"},{"name":"tamarind-mcp-submit-and-poll","interface":{"brand_color":null,"iconography":"hierarchy","display_name":"Tamarind MCP Job Runner","default_prompt":"Use $tamarind-mcp-submit-and-poll to validate, estimate, submit, monitor, and recover this Tamarind job.","icon_large_url":null,"icon_small_url":null,"short_description":"Run one validated Tamarind MCP job safely"},"description":"Run one known Tamarind Bio tool end to end through MCP by validating settings, estimating runtime and weighted hours, confirming consequential choices, submitting once, polling with a finite deadline, and retrieving results. Also use to reattach to one existing job. Not for tool selection, batch submission, or CLI execution.","plugin_release_skill_id":"pluginrsk_6a66bb45c2248191afe63300c482a4db"},{"name":"tamarind-mcp-tool-discovery","interface":{"brand_color":null,"iconography":"search","display_name":"Tamarind MCP Tool Discovery","default_prompt":"Use $tamarind-mcp-tool-discovery to choose the best live Tamarind tool for this scientific goal.","icon_large_url":null,"icon_small_url":null,"short_description":"Choose a live Tamarind tool through MCP"},"description":"Choose a Tamarind Bio tool by querying the live MCP catalog and schema. Use when the user requests MCP, has not named a tool, several tools could fit, or availability and required inputs must be verified. 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