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Scientific Research Codex plugins

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Scientific Research plugins 3

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Slide ViewerOpenAIExplore whole-slide microscopy, digital pathology, tissue histology, and spatial transcriptomics in an interactive scientific viewer.

Publisher keywords · listing

…e-tiff ome-zarr ngff aperio h5ad anndata spatial-transcriptomics spatial-omics spatial-biology gene-expression spatial-gene-expression visium 10x-genomics segmentation annotations overlays clusters spatial-domains geojson cellvit tissue tissue-architecture whole-slide whole-slide-imaging wsi region-…

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Publisher full description

…ble SVS, TIFF, DICOM, OME-Zarr or AnnData sources; navigate image pyramids, compare registered gene expression, inspect cells and molecules, adjust microscopy channels, and edit annotated regions. Use source-backed scientific workflows and single-user projects while preserving the original specimen.…

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Scientific ResearchVersion 0.1.65
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Genomic IntelligenceGenomic Intelligence

Publisher description

…ter region prediction, splice donor/acceptor sites, enhancer activity, chromatin state, sequence-to-expression, and de-novo gene annotation, plus a composite find-genes-then-predict-expression workflow. Give it a gene symbol, a genomic region, or a FASTA; it resolves the sequence from Ensembl and re…

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Scientific ResearchVersion 1.1.0
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Life Sciences DatabasesOpenAI

Publisher full description

…s you query and interpret structured public life-science resources across human genetics, variants, expression, functional genomics, proteins, structures, pathways, chemistry, pharmacology, clinical evidence, and public omics datasets. Use focused skills for source-specific lookups or combine a smal…

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Scientific ResearchVersion 0.1.5
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