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Scientific Research Codex plugins

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Explore 5,434 plugins across 14 categories.

Scientific Research plugins 25

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PartnerProf - Quanntum CorePETR SCHOENPartnerProf is a unique tool that provides a deterministic answer to a fundamental question: does at least one feasible state exist withi...

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PartnerProf - Quanntum Core

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PartnerProf is a unique tool that provides a deterministic answer to a fundamental question: does at least one feasible state exist within a locally defined reality governed by highly complex dependencies an…

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Scientific ResearchVersion 2.0.4
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PeptidePrices COA VerifierPeptidePrices LLCSearch and inspect public peptide certificates of analysis using the PeptidePrices evidence library and supported laboratory records. Loo...

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PeptidePrices COA Verifier

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PeptidePrices LLC

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Publisher description

Search and inspect public peptide certificates of analysis using the PeptidePrices evidence library and supported laboratory records. Look up exact report identifiers or public certificate URLs, review vendor and compound matches, inspect reported testing panels, browse a ven…

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Scientific ResearchVersion 1.0.0
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ProtoLaboratory of Evolutionary Design, Stanford University and Arc InstituteProto helps users run biological AI and bioinformatics tools, inspect their schemas and examples, run analyses and models, deploy these t...

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Proto

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Proto helps users run biological AI and bioinformatics tools, inspect their schemas and examples, run analyses and models, deploy these tools to a Modal compute workspace, and collect or fetch stored…

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Scientific ResearchVersion 0.0.1
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Adaptyv BioOpenAIGrounded workflows for preparing, estimating, submitting, and monitoring protein experiments through Adaptyv Bio's hosted MCP server.

Publisher subtitle

Plan and manage protein experiments with review gates

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adaptyv-bio life-science protein wet-lab experiments mcp

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Publisher description

Grounded workflows for preparing, estimating, submitting, and monitoring protein experiments through Adaptyv Bio's hosted MCP server.

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An OpenAI-authored integration for Adaptyv Bio's hosted MCP server. Estimate and prepare protein experiments, create reviewable drafts, explicitly approve submission and commercial transitions, and monitor status and results without collapsing real-world actions into a single step…

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Scientific ResearchVersion 0.0.4
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Biohub ESMChan Zuckerberg Biohub, Inc.Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, a...

Publisher subtitle

Understand proteins with ESM

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biohub esm esmc esmfold2 esm-atlas protein-language-model mutation-landscape sparse-autoencoder multiple-sequence-alignment structure-prediction protein-design computational-biology modal hugging-face

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Publisher description

Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, and plan binder workflows.

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Biohub ESM helps you understand proteins from a name, sequence, or file: explore mutation landscapes, interpret what ESMC sees, predict and view all-atom structures, and discover related proteins. It chooses the right ESM workflow,…

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Scientific ResearchVersion 0.2.4
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Biohub ESMChan Zuckerberg Biohub, Inc.Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, and discover relatives.

Publisher subtitle

Understand proteins with ESM

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biohub esm esmc esmfold2 esm-atlas protein-language-model mutation-landscape sparse-autoencoder multiple-sequence-alignment structure-prediction computational-biology modal hugging-face

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Publisher description

Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, and discover relatives.

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Biohub ESM helps you understand proteins from a name, sequence, or file: explore mutation landscapes, interpret what ESMC sees, predict and view all-atom structures, and discover related proteins. It chooses the right ESM workflow,…

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Scientific ResearchVersion 0.4.3
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BoltzBoltzPredict structures, screen molecules and proteins, and design binders.

Publisher subtitle

Predict structures, screen molecules and proteins, and design binders

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Publisher keywords · package

boltz boltz-api go-cli computational-biology protein-design protein-screening small-molecule-design virtual-screening structure-prediction molecular-modeling drug-discovery biotech

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Publisher description

Predict structures, screen molecules and proteins, and design binders.

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Use Boltz from Codex for biomolecular modeling workflows: predict structure and binding for protein, RNA, DNA, and ligand complexes; rank small-molecule or protein libraries against targets; and design novel small molecules, peptides, antibodies, nanobodies,…

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Scientific ResearchVersion 0.1.1
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Life Sciences LiteratureOpenAIBiomedical literature discovery across PubMed, PMC Open Access, bioRxiv, and medRxiv.

Publisher subtitle

Find biomedical papers, preprints, and open-access full text

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Publisher keywords · listing

life-science literature pubmed pmc biorxiv medrxiv preprints

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…l literature using PubMed publication records, PMC Open Access availability, and bioRxiv or medRxiv preprints. Use it for focused searches, citation metadata, publication linkage, and source-backed comparisons between preprints and published articles.

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Scientific ResearchVersion 0.1.5
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Peptide CriticPeptide CriticPeptide Critic provides independent vendor reviews, third-party lab testing and price comparison for research peptides such as BPC-157, G...

Publisher subtitle

Peptide reviews & prices

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Peptide Critic provides independent vendor reviews, third-party lab testing and price comparison for research peptides such as BPC-157, GHK-Cu and TB-500. Find compounds by name or synonym, compare vendor ratings an…

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Scientific ResearchVersion 1.0.0
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Tamarind BioTamarind BioConnect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300...

Publisher subtitle

Protein and molecular design

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Connect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300+ tools — structure prediction, docking, protein and antibody design, molecular dynamics, and property prediction.…

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Scientific ResearchVersion 1.0.0
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Life Sciences DatabasesOpenAIStructured public life-science database research across genetics, omics, biology, chemistry, structure, and clinical evidence.

Publisher keywords · listing

life-science databases bioinformatics genetics omics proteins chemistry clinical-research

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Helps you query and interpret structured public life-science resources across human genetics, variants, expression, functional genomics, proteins, structures, pathways, chemistry, pharmacology, clinical evidence, and public o…

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Scientific ResearchVersion 0.1.5
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Molecular Structure ViewerOpenAIQuery, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes.

Publisher keywords · listing

structure pdb cif mmcif mol sdf mol2 pqr pdbqt gro xyz molstar protein ligand molecule bioinformatics rendering alignment animation movie png mp4 density trajectory analysis

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Molecular Structure Viewer provides a compact Select, Analyze, Compare, Related data, Style, Animate, and Export workbench over Mol*. Use one revisioned atom-level query and scene contract across the UI and Codex to measure geo…

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Scientific ResearchVersion 0.1.90
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NVIDIA BioNeMo Agent ToolkitNVIDIA BioNeMoNVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and b...

Publisher keywords · listing

bionemo life-sciences drug-discovery protein-folding molecular-docking generative-chemistry genomics protein-design cuda-x nim

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NVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and biomarker discovery as ready-to-call tools.

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…decade of NVIDIA life-sciences libraries, NIMs, and open models as portable agent skills: structure prediction, docking, generative chemistry, genomics, and de novo protein design. The plugin helps an agent pick the right tool, prepare inputs, run it, and interpret outputs.

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Scientific ResearchVersion 0.1.0
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Seq2MusicJacob Michael VoganOffline biological sequence/music conversion with reversible MIDI, WAV, and MusicXML, accessible score notation, and lossy arbitrary-audi...

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bioinformatics sonification protein sequence midi

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Seq2Music turns protein, DNA, and RNA sequences into music and score sheets. It can both encode and decode. It can also convert your audio a new protein, DNA, or RNA sequence by matching sounds and notes to sequence…

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Scientific ResearchVersion 0.3.2
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Slide ViewerOpenAIExplore whole-slide microscopy, digital pathology, tissue histology, and spatial transcriptomics in an interactive scientific viewer.

Publisher keywords · listing

…tiff ome-zarr ngff aperio h5ad anndata spatial-transcriptomics spatial-omics spatial-biology gene-expression spatial-gene-expression visium 10x-genomics segmentation annotations overlays clusters spatial-domains geojson cellvit tissue tissue-architecture whole-slide whole-slide-imaging wsi region-of…

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…e SVS, TIFF, DICOM, OME-Zarr or AnnData sources; navigate image pyramids, compare registered gene expression, inspect cells and molecules, adjust microscopy channels, and edit annotated regions. Use source-backed scientific workflows and single-user projects while preserving the original specimen. U…

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Scientific ResearchVersion 0.1.65
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Biological Sequence & Alignment ViewerOpenAI

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…or circular records, manage annotations, translate with the right genetic code, find ORFs, explore primers and restriction digests, inspect measured chromatogram signals, align or edit copies, build graphical guide trees, load mapped variant/read evidence, export reproducible artifacts, restore ses…

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Scientific ResearchVersion 0.1.43
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Genomic IntelligenceGenomic Intelligence

Publisher description

Run six DNA sequence-analysis tasks over the hosted Genomic Intelligence API: promoter region prediction, splice donor/acceptor sites, enhancer activity, chromatin state, sequence-to-expression, and de-novo gene annotation, plus a composite find-genes-then-predict-expression wo…

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Scientific ResearchVersion 1.1.0
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HoldsUpAiteklabs

Publisher description

…le study, or the money behind it from public funding registers. Sign in by email, pay per call from prepaid credits (1 credit = 1 US cent: a read 1, a claim search 2, a live verification 30), and see the cost and your balance in every answer. Evidence summaries about published research, not medical…

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Scientific ResearchVersion 1.0.0
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InductiveInductive Bio

Publisher description

Inductive's absorption, distribution, metabolism, excretion, and toxicity (ADMET) models predict the chemical and pharmacokinetic properties that determine whether a molecule can become a viable drug. By surfacing these predictions directly in your conversation, scientists can evaluate co…

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Scientific ResearchVersion 2.0.0
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NGS Analysis WorkbenchOpenAI

Publisher description

Journey-oriented NGS data understanding, scientific analysis design, approval-gated execution, and file-backed result interpretation.

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…n toward a scientific outcome, bind that design to live Nextflow/nf-core or Snakemake capabilities, preserve checksum-bound native approval, and interpret completed results from file-backed evidence.

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Scientific ResearchVersion 0.2.16
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PendarPendarlabs

Publisher description

…rts how many papers exist, whether output is growing or flattening, which disciplines and countries produce them, and which papers to read first. Every figure is counted across the whole corpus rather than estimated from a sample, so you can plan around it. Point it at a paper and it traces what hap…

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Scientific ResearchVersion 2.0.0
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QualiTaTiQualitati

Publisher description

…end without leaving the conversation. What you can do: - Interview studies: create an AI-interview project from a topic, draft or refine the interview guide, set the language, voice or text mode and duration, and get the participant link to share. QualiTaTi's AI interviewer then runs the interviews…

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Scientific ResearchVersion 1.0.0
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Rosalind WorkbenchOpenAI

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A workspace connecting scientific tools for sequencing analysis, evidence synthesis, protein and small-molecule design, structure and sequence analysis, safety and developability, experimental validation, and GPT-Rosalind access.

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Scientific ResearchVersion 0.2.5-research-preview
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RowanRowan Scientific Corporation

Publisher description

Use Rowan in ChatGPT to run and manage computational chemistry and structural biology workflows. Predict molecular properties, search conformers and reaction paths, and calculate energies, structures, spectra, and electronic properties with quantum chemistry. Prepare proteins and run structure pr…

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Scientific ResearchVersion 1.0.1
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UndermindUndermind AI, Inc.

Publisher description

Bring all scientific literature into ChatGPT: - Comprehensive search finds every paper - Reads and understands full texts, figures, and tables - Open access PDFs grabbed automatically - Your uploaded PDFs made available to all chats - Organizes your p…

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Scientific ResearchVersion 2.0.0
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