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Scientific Research Codex plugins

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Explore 5,324 plugins across 14 categories.

Scientific Research plugins 10

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Molecular Structure ViewerOpenAIQuery, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes.

Plugin name

Molecular Structure Viewer

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Package name

structure-viewer

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Publisher subtitle

Visualize and interact with molecular structures in Codex.

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Publisher keywords · listing

structure pdb cif mmcif mol sdf mol2 pqr pdbqt gro xyz molstar protein ligand molecule bioinformatics rendering alignment animation movie png mp4 density trajectory analysis

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Publisher description

Query, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes.

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Publisher full description

Molecular Structure Viewer provides a compact Select, Analyze, Compare, Related data, Style, Animate, and Export workbench over Mol*. Use one revisioned atom-level query and scene contract across the UI and Cod…

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Scientific ResearchVersion 0.1.90
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BoltzBoltzPredict structures, screen molecules and proteins, and design binders.

Publisher subtitle

Predict structures, screen molecules and proteins, and design binders

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Publisher keywords · package

…-cli computational-biology protein-design protein-screening small-molecule-design virtual-screening structure-prediction molecular-modeling drug-discovery biotech

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Publisher description

Predict structures, screen molecules and proteins, and design binders.

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Use Boltz from Codex for biomolecular modeling workflows: predict structure and binding for protein, RNA, DNA, and ligand complexes; rank small-molecule or protein libraries against targets; and design novel small molecules, peptides, antibodies, nanobodies, or cust…

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Scientific ResearchVersion 0.1.1
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Life Sciences DatabasesOpenAIStructured public life-science database research across genetics, omics, biology, chemistry, structure, and clinical evidence.

Publisher subtitle

Query structured public life-science databases

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Publisher description

Structured public life-science database research across genetics, omics, biology, chemistry, structure, and clinical evidence.

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Publisher full description

Helps you query and interpret structured public life-science resources across human genetics, variants, expression, functional genomics, proteins, structures, pathways, chemistry, pharmacology, clinical evidence, and public omics…

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Scientific ResearchVersion 0.1.5
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Biohub ESMChan Zuckerberg Biohub, Inc.Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, a...

Publisher keywords · listing

…esm-atlas protein-language-model mutation-landscape sparse-autoencoder multiple-sequence-alignment structure-prediction protein-design computational-biology modal hugging-face

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Publisher description

…rstand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, and plan binder workflows.

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…sequence, or file: explore mutation landscapes, interpret what ESMC sees, predict and view all-atom structures, and discover related proteins. It chooses the right ESM workflow, preserves confidence and provenance, and presents results automatically. It also supports MSA-guided and modified-complex…

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Scientific ResearchVersion 0.2.4
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Genomic IntelligenceGenomic Intelligence

Publisher description

…e it a gene symbol, a genomic region, or a FASTA; it resolves the sequence from Ensembl and returns structured predictions. No local GPU, model weights, or API key required. For research use, not clinical or diagnostic decisions.

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Scientific ResearchVersion 1.1.0
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NVIDIA BioNeMo Agent ToolkitNVIDIA BioNeMo

Publisher full description

A decade of NVIDIA life-sciences libraries, NIMs, and open models as portable agent skills: structure prediction, docking, generative chemistry, genomics, and de novo protein design. The plugin helps an agent pick the right tool, prepare inputs, run it, and interpret outputs.

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Scientific ResearchVersion 0.1.0
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PeptidePrices COA VerifierPeptidePrices LLC

Publisher description

…d, or unresolved records remain unknown rather than being treated as failures. Each result includes structured evidence and links to PeptidePrices, certificate documents, and specific official laboratory records when available.

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Scientific ResearchVersion 1.0.0
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Rosalind WorkbenchOpenAI

Publisher full description

…ng scientific tools for sequencing analysis, evidence synthesis, protein and small-molecule design, structure and sequence analysis, safety and developability, experimental validation, and GPT-Rosalind access.

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Scientific ResearchVersion 0.2.5-research-preview
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RowanRowan Scientific Corporation

Publisher description

…kflows. Predict molecular properties, search conformers and reaction paths, and calculate energies, structures, spectra, and electronic properties with quantum chemistry. Prepare proteins and run structure prediction, docking, molecular dynamics, and binding affinity workflows. Calculations are save…

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Scientific ResearchVersion 1.0.1
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Tamarind BioTamarind Bio

Publisher description

…for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300+ tools — structure prediction, docking, protein and antibody design, molecular dynamics, and property prediction. Chain tools into pipelines, batch many inputs at once, and pull back structures, results, and l…

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Scientific ResearchVersion 1.0.0
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