← Files Tamarind BioARCHIVED FILE
SKILL.md
1.58 KB · Sep 30, 2026 · 22:50 UTC
--- name: tamarind-mcp-developability description: Score protein or antibody candidates for stability, aggregation, solubility, viscosity, polyreactivity, glycosylation, immunogenicity, and related developability risks with Tamarind Bio through MCP. Use as a post-design filter. Not for generating molecules, folding structures, or measuring binding alone. --- # Filter candidates for developability Treat developability as a panel of orthogonal risks, not one universal score. ## Select the panel Call `listTags` to obtain current function values, then use filtered `getAvailableTools` calls for developability, stability, aggregation, solubility, immunogenicity, or another relevant axis. Inspect each selected tool with `getJobSchema`. Match the input type and modality. Sequence-only, structure-based, paired-antibody, and nanobody-specific tools are not interchangeable. Upload structures with `uploadFile` or use an accepted prior-job `s3Path`. Call `validateJob` and `estimateTime` for each planned tool. For a candidate list, use `tamarind-mcp-batch` so one settings policy is applied consistently; validate every distinct conditional payload shape before multiplying the run. ## Execute and interpret Use `tamarind-mcp-submit-and-poll` for a single candidate and `tamarind-mcp-batch` for many independent candidates. Report every risk axis separately with the tool, units, direction, and threshold rationale. Preserve a Pareto set when candidates trade affinity against solubility, stability, or immunogenicity. Computational predictions prioritize assays and formulation work; they do not replace them.
SHA-256: e37ffecc4613374e9b8695e5444c35b941e0d824a8345be0615d25af12131280