← Biohub ESMSOURCE FILE ARCHIVE

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Biohub ESM · 70 files · 285 KB · Oct 5, 2026 · 18:29 UTC

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FileSize
.app.json
SHA-256a598b9248ae7f7ae56ffaecc3689ab58fabfbfafcd5c5adf3ff6922e80823aaf
98 Bytes
.claude-plugin/plugin.json
SHA-256d4f81996a48b791f31568b9d7fe74ee71779e2488f90058ffbe296e66eca2965
735 Bytes
.codex-plugin/plugin.json
SHA-25633c66c2c3a75b1c3a985d1dae706548b36e7d5dfc7f34141d55e60582f2c074d
8.52 KB
.mcp.json
SHA-2565f2eb5dad4014dc757c414abdebb248db0c2397fa6e5a5754161e35dd8a09fea
107 Bytes
LICENSE
SHA-256c8e7b28a12217cd9e61a80e81933e78482baea2ab18384efc2b66697ad3c6df7
1.06 KB
README.md
SHA-256f33b0b05c1e7dfb6e17d7636528e7f76c8f30b0b079efaead25325ef58e0c504
9.15 KB
assets/app-icon.png
SHA-2561a637924e74294a21d2d4812113456057e5b5041f50fc01457cac0fe35779044
12.9 KB
assets/app-icon.svg
SHA-256452cc732169c46af02245dd160273b64c425ca49ace66a6fd59521b16691ad1e
1.18 KB
examples/activation-cases.json
SHA-25658969828d1e2ce02229bc8b00e2fef340bec5ea50393f842c91bfdaffab6d311
3.89 KB
examples/gb1-esmfold2-fast-fold-request.json
SHA-25676b7aafc8c69a19512ae7029eae07430c410869d4646a06b4dcb41185c88f82e
396 Bytes
examples/starter-examples.json
SHA-256c7469f7795b381636cb6cb4de7cfd5aa0184ce921019d00b71fd29a4efd0be70
29.8 KB
examples/tutorial-use-cases.json
SHA-2564acead9dd48ee5f696e2ef53b894fb5949a618dcbe0b5ae23ab1b481c428b9be
32 KB
mcp.json
SHA-2564d1b39fd6fd9f8dbedce32fe1629631ec57b12ab3c67cb31dcec799a5405bd17
190 Bytes
plugin.json
SHA-25620cb0a41436abd384748031866968d8617cf2e2d374d12303bbead7e9ff58773
8.72 KB
references/api-contract-audit.md
SHA-2560e8a78c58c79388f31b920b1ee3a1415bb76cab04b1d54b4d7a30f02a63e9f97
10 KB
references/component-contract-audit.md
SHA-256edd04839a926f83711078c7d466e07c248167fa5702dcda2b35fe337d73c5954
25.1 KB
references/managed-api-field-audit.md
SHA-2561b5bbbccb8026913a713f4d711a0cc92731ab8f850c6ed68b6757c34f9ff2075
51.4 KB
references/safety-and-provenance.md
SHA-256c6c96e617602da66243e09723e1f8812a8dd9f762442f8f570257980653191a8
5.05 KB
references/source-pins.md
SHA-2569d03c52c2aaedc2ac8e0bc07a00c8ed108e133b4030e1350903db9652adc75d0
7 KB
references/structure-viewer-handoff.md
SHA-2569c9730ba9cc1d1ef3433d2037cd63f3431a2eab61a72522644f8925fb6ff2dba
15.4 KB
scripts/biohub_esm.py
SHA-256130c5f0ce38eaba6c26f05d07eb78e45d64406a96a16847619fc874f70f4215d
178 KB
scripts/biohub_esm_lib/__init__.py
SHA-256cccc4f6c57cfe261c1d2a579e92296696f041529d453712b88a406e01f1f4295
2.3 KB
scripts/biohub_esm_lib/activation.py
SHA-25661e738fdaa264a648473c6ddfe97341604bb3d79280653987e309e2e52bdebdc
3.31 KB
scripts/biohub_esm_lib/atlas.py
SHA-256abd6ff781b3a4bd64ecd1b20c9c1c059186f590afcab4b552d8a52bbf0b17166
122 KB
scripts/biohub_esm_lib/atlas_jobs.py
SHA-256f52b72c3f36a1f18b427dfad1054f3e77b8d55af3d99d3aa7bf32523dbfa7174
71.6 KB
scripts/biohub_esm_lib/cli_parser.py
SHA-25670f4c2f82b9a6f87514cd557cecdfb0dc7b6eab7f3747b12ff2b9658bf492a02
11.9 KB
scripts/biohub_esm_lib/constants.py
SHA-256be4a66793db6034fd2e4aff3daffb0841add4b41c397befb9d0816dd55f491b4
5.39 KB
scripts/biohub_esm_lib/diagnostics.py
SHA-256f22cb79129a263bf47adf9185f5f425bbd753d9e1b4b398f40e037552536e3da
11.9 KB
scripts/biohub_esm_lib/errors.py
SHA-25688538459efb16e114b0ad58055ad1491778895b25e21e53909f5c53b4872d60b
2.6 KB
scripts/biohub_esm_lib/esmc.py
SHA-25696cbaa293ba29ecc91ba2b20cfda039d7b42fcb6511b0aa2a694d454e0a977b4
12.4 KB
scripts/biohub_esm_lib/esmc_landscape.py
SHA-256f8114e9620d73e4a524d63202c0bed35596e4c0a49a850389cb1372b0c051cdd
12.1 KB
scripts/biohub_esm_lib/esmc_landscape_jobs.py
SHA-256aaaeea48545f3028dbb2404b0fe4345e547207fe321da5d9b95b4bcd01f4ea19
17 KB
scripts/biohub_esm_lib/http.py
SHA-256fa718c21d72cd28787108aa07b2cca609cdc60269867097906838bf0f8c3f388
71.6 KB
scripts/biohub_esm_lib/managed.py
SHA-25675b0ea310bc843e7a1a77ad3213c3b2dc398b68a870dc06e97baaecb757a2c72
57.3 KB
scripts/biohub_esm_lib/managed_readiness.py
SHA-256f2a3986cd8011f0cc39c3f76ae35b18a938668cf307cf41e56f9a5d0113974ef
13.9 KB
scripts/biohub_esm_lib/modal_jobs.py
SHA-256fbf76e3805d8f5cb6c7cec77cf443ee3f156399882414d600c9468c75170a7cf
50.6 KB
scripts/biohub_esm_lib/presentation.py
SHA-2567d6c7a78efd5d5c4004c05b6ef477f4fe31163e735c5cfd5763b9f678fed1ce0
8.55 KB
scripts/biohub_esm_lib/provenance.py
SHA-2568663b1d82b87b9818460f6151611d9b4e5104d8d8db6b98bcf4b55b5013f1e40
72.8 KB
scripts/biohub_esm_lib/routing.py
SHA-256be9f03c61cc9799555aee951d03f44eb86d0b06178207c6ee928cda5aa3c8ce5
7.51 KB
scripts/biohub_esm_lib/security.py
SHA-256c189ebef518b92b6d40ac30425fee6a14b370d4aed0b7ea148a02646e811dd61
33 KB
scripts/biohub_esm_lib/starter_examples.py
SHA-25658fcbaa1a551dfde6b0c5bbb0512ef83bafa5c1f804c7153ac829119914c064e
84.6 KB
scripts/biohub_esm_lib/validation.py
SHA-256663563ab2e11eb372bf9287e8ea552553d61676bb825c64245dab435aa9c768f
40 KB
scripts/validate_starter_examples.py
SHA-2564e4b27f682d2274151940583b85284d691507a42951351bbbc8091cc0b0e716f
631 Bytes
skills/biohub-esm-setup/LICENSE.md
SHA-256d1a08d56a091de86aca9545985bbbe73f71ed786f8d7d6dd6fc188848d257565
1.07 KB
skills/biohub-esm-setup/SKILL.md
SHA-25674b2705dac1af7ca3fd560690194aca8801c3f8a16ae052c93cbcebd0cc36e56
15.4 KB
skills/biohub-esm-setup/agents/openai.yaml
SHA-25643217309e4c637f94fed1f55e5450a3fe3c45dd4fd7d4dddf0240f7bd157b311
234 Bytes
skills/biohub-esm-setup/references/setup.md
SHA-256f8b9a599d0bd48076d287bad44104dabdcc693a80e0998658aacbee5662c8522
8.57 KB
skills/biohub-esm/LICENSE.md
SHA-256d1a08d56a091de86aca9545985bbbe73f71ed786f8d7d6dd6fc188848d257565
1.07 KB
skills/biohub-esm/SKILL.md
SHA-256218f48eae381eb42967f333d36b6cbb93614c64cebd71f998697a8cff50f0397
11.3 KB
skills/biohub-esm/agents/openai.yaml
SHA-2565da777f57b70e6ab202e94e56482149f9f385185bd603156a6519f77cef4ed8f
228 Bytes
skills/biohub-esm/references/failures.md
SHA-25608a82789ba29aa18e882d26652a189b37fad49a1fdecba079365db21c9372eab
3.32 KB
skills/biohub-esm/references/routing.md
SHA-256805d23a7ae860af41b7f10249006c2eeeecea43b6e1f79ba7fe270d99fcd12c2
7.51 KB
skills/esm-atlas/LICENSE.md
SHA-256d1a08d56a091de86aca9545985bbbe73f71ed786f8d7d6dd6fc188848d257565
1.07 KB
skills/esm-atlas/SKILL.md
SHA-256798a1220ab9d979279cc934f90980f3cc88afe79c24b817a918d018b1ed148a5
11.8 KB
skills/esm-atlas/agents/openai.yaml
SHA-25648b138337654a9f71365db450bb78ebe100ac9dbf061917888ad4dcda45d43d8
431 Bytes
skills/esm-atlas/references/api.md
SHA-2563d6f77b7725489ef7451d22d3a8c7bae4b8364c1f75a727642ac068910d562f8
7.26 KB
skills/esm-atlas/references/bulk-data.md
SHA-256ac463925fcbe69f47d61d8b18fb571bbe62cc70ea7b1b633de32abdf742c3bee
4.23 KB
skills/esm-atlas/references/mcp-tools.md
SHA-256c5b71ec1f4fa657f4bd0c1a0db9ff9dc14635677a2065161e7aa86e23aad4a35
5.82 KB
skills/esmc/LICENSE.md
SHA-256d1a08d56a091de86aca9545985bbbe73f71ed786f8d7d6dd6fc188848d257565
1.07 KB
skills/esmc/SKILL.md
SHA-256dfb27a176e7408aa0b637f1e11ca3d4f40ae5924e56342f6a0bacec604e0f4c7
13.1 KB
skills/esmc/agents/openai.yaml
SHA-2561ae50788de7b38ebf09bde253b3d70eb2051b819327238150a872fd6c5979bcd
195 Bytes
skills/esmc/references/analysis.md
SHA-25653996e82fc66a0d387ca5c1c6a333dfb2399c1794a953b9f5855cd303dab8fd7
6.63 KB
skills/esmc/references/api.md
SHA-256fb3d91b016c58ddab1129479807a8fa6264fe3649c514115ebed919025852dc4
6.09 KB
skills/esmc/references/self-hosted.md
SHA-25641f478898a0af3b88172b6d11fe8fd26718981b8942dda1e636799c67961305c
2.08 KB
skills/esmfold2/LICENSE.md
SHA-256d1a08d56a091de86aca9545985bbbe73f71ed786f8d7d6dd6fc188848d257565
1.07 KB
skills/esmfold2/SKILL.md
SHA-2564d49627783774b4505ae34be71624deb63f9f53c219969d4b59efa8308ea754e
12.2 KB
skills/esmfold2/agents/openai.yaml
SHA-2569ad5b09671cb284420ed553056bfdcb5d14beec161bb92389c8a0ee38d0b1edf
190 Bytes
skills/esmfold2/references/api.md
SHA-256f8a801a9db2868dbc5fec581015f653d86e1995be207fd6c0ae2e48ac735ff43
8.8 KB
skills/esmfold2/references/inputs-and-results.md
SHA-256cf307c27fca32d7a4e1003d0fd238064ad035eba88b9b8981cc89c4b332a75f6
4.62 KB
skills/esmfold2/references/self-hosted.md
SHA-25678b483f07c35913f3670654e41ff6b90bdc9912d982edcb7033e6f8c10f5187d
3.53 KB

Files are archived as data; their code has not been executed. The package does not include private remote service code.