.codex-plugin/plugin.json

{
  "name": "slide-viewer",
  "version": "0.1.65",
  "description": "Explore whole-slide microscopy, digital pathology, tissue histology, and spatial transcriptomics in an interactive scientific viewer.",
  "homepage": "https://openai.com/",
  "repository": "https://github.com/openai/plugins",
  "license": "MIT",
  "author": {
    "name": "OpenAI",
    "email": "support@openai.com",
    "url": "https://openai.com/"
  },
  "keywords": [
    "slide",
    "pathology",
    "histology",
    "histopathology",
    "digital-pathology",
    "microscopy",
    "svs",
    "tif",
    "tiff",
    "dicom",
    "ome-tiff",
    "ome-zarr",
    "ngff",
    "aperio",
    "h5ad",
    "anndata",
    "spatial-transcriptomics",
    "spatial-omics",
    "spatial-biology",
    "gene-expression",
    "spatial-gene-expression",
    "visium",
    "10x-genomics",
    "segmentation",
    "annotations",
    "overlays",
    "clusters",
    "spatial-domains",
    "geojson",
    "cellvit",
    "tissue",
    "tissue-architecture",
    "whole-slide",
    "whole-slide-imaging",
    "wsi",
    "region-of-interest",
    "viewer"
  ],
  "mcpServers": "./.mcp.json",
  "skills": "./skills/",
  "interface": {
    "displayName": "Slide Viewer",
    "shortDescription": "Explore whole-slide microscopy, digital pathology, and spatial transcriptomics.",
    "longDescription": "Explore real tissue images and spatial measurements in one research workspace. Open compatible SVS, TIFF, DICOM, OME-Zarr or AnnData sources; navigate image pyramids, compare registered gene expression, inspect cells and molecules, adjust microscopy channels, and edit annotated regions. Use source-backed scientific workflows and single-user projects while preserving the original specimen. UI actions have typed agent counterparts; availability depends on the source and host. Read current selections and annotations on demand, and capture the current viewport or a source region for image interpretation. Research use, not clinical diagnosis.",
    "developerName": "OpenAI",
    "category": "Scientific Research",
    "capabilities": ["Interactive", "Read", "Write"],
    "websiteURL": "https://openai.com/",
    "privacyPolicyURL": "https://openai.com/policies/privacy-policy/",
    "termsOfServiceURL": "https://openai.com/policies/terms-of-use/",
    "defaultPrompt": [
      "Download OpenSlide’s full CMU-1 brightfield slide (132.6 MB), open it, and ask me to draw a region before inspecting tissue.",
      "Download Squidpy’s H&E mouse-brain crop, open its registered tissue image, and inspect the real spot and gene counts.",
      "Download Squidpy’s fluorescence mouse-brain crop and compare Slc17a7/Gad1 over its registered tissue preview, if present."
    ],
    "composerIcon": "./assets/icon.svg",
    "logo": "./assets/icon.svg",
    "brandColor": "#B64B7A",
    "screenshots": []
  }
}