← Biohub ESMSOURCE FILE ARCHIVE

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Biohub ESM · 65 files · 256 KB · Sep 30, 2026 · 23:14 UTC

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FileSize
.codex-plugin/assets/composer-icon.svg
SHA-256452cc732169c46af02245dd160273b64c425ca49ace66a6fd59521b16691ad1e
1.18 KB
.codex-plugin/assets/logo.svg
SHA-256452cc732169c46af02245dd160273b64c425ca49ace66a6fd59521b16691ad1e
1.18 KB
.codex-plugin/plugin.json
SHA-2561414371e8bc88f4413e4c48bc3ce8646b312ef6a3b213ba94848c6204e137660
2.15 KB
LICENSE
SHA-2562fa1dddfdc8a222605d96fbc24157505d45a8695fee25dad85163e09d9907eee
1.07 KB
README.md
SHA-256645d17716039807b071746e7050e34cd41417253e9c83457390ce2c7945c8f44
8.58 KB
assets/app-icon.svg
SHA-256452cc732169c46af02245dd160273b64c425ca49ace66a6fd59521b16691ad1e
1.18 KB
examples/activation-cases.json
SHA-2560fd6115e2e7ad0aca42c47ce832d68a0e04a47eb5a0c2f1891a2c8825e9c2477
3.92 KB
examples/gb1-esmfold2-fast-fold-request.json
SHA-25676b7aafc8c69a19512ae7029eae07430c410869d4646a06b4dcb41185c88f82e
396 Bytes
examples/starter-examples.json
SHA-25640594ccaaa5829c983719df2bc206d70674d2872b83cd73f5b04abf8da36043e
30.5 KB
examples/tutorial-use-cases.json
SHA-2568f4df81c5965ab3f49fff5b887f627e2a725db3922ee56eef36a2fb6d692339a
26.4 KB
references/api-contract-audit.md
SHA-2561263bfd09d73d03a71b816639aa0508257f7a19168b3955819fd12cc19c6af0e
10 KB
references/component-contract-audit.md
SHA-256489aa0a18c40eb6b8f772258512aa7f5a754b1bdaafd13caf309f9db1badc926
25.3 KB
references/managed-api-field-audit.md
SHA-256907570bbe4cbdeb7c5d322e1b7b853ac79c25a4c6780cac5800ce55e14f41f2e
50.9 KB
references/safety-and-provenance.md
SHA-256eeae1681f27cc4abd69aa8c327e4fd1a21fe5efd7997f70ea1127c9b7a569930
4.69 KB
references/source-pins.md
SHA-256ced9c379b526242c8d53fe72e7ea0355817601d1bff21ae781145e20058f5b00
6.28 KB
references/structure-viewer-handoff.md
SHA-25626a67840bfa7c03dc1ec92862ed8b4b941328fe7f05b95d17df3e521d05435f9
6.71 KB
scripts/biohub_esm.py
SHA-2567a4d78bc345c53c2888be25c381e42311b48a77097c957701062946d6fe47167
177 KB
scripts/biohub_esm_lib/__init__.py
SHA-256f7f0b3c1e05461b6b4e0c2afec834595896d798a5c730267ee598dbbc20b3868
1.9 KB
scripts/biohub_esm_lib/activation.py
SHA-2566a5bef970c7ffafabef40bdf61ed376a49a987a72d059820fbd1e8320bb424c9
3.57 KB
scripts/biohub_esm_lib/atlas.py
SHA-256abd6ff781b3a4bd64ecd1b20c9c1c059186f590afcab4b552d8a52bbf0b17166
122 KB
scripts/biohub_esm_lib/atlas_jobs.py
SHA-256f52b72c3f36a1f18b427dfad1054f3e77b8d55af3d99d3aa7bf32523dbfa7174
71.6 KB
scripts/biohub_esm_lib/binder_smoke.py
SHA-256be28bf759e1aaa843ca8aa1ba8f8845ee4c694ebc0cd5ee1badabd0f61e6fcfc
9.18 KB
scripts/biohub_esm_lib/cli_parser.py
SHA-2566b67d0d5c8d3495b8b16ff2901de17998847ce632fc45189ecb7bcc2fe0c110f
11.9 KB
scripts/biohub_esm_lib/constants.py
SHA-25609f4767da203cb0779b96a619532ad7b8ed7b9b63ae592bf064fd46bf7268a55
5.51 KB
scripts/biohub_esm_lib/diagnostics.py
SHA-256f22cb79129a263bf47adf9185f5f425bbd753d9e1b4b398f40e037552536e3da
11.9 KB
scripts/biohub_esm_lib/errors.py
SHA-25688538459efb16e114b0ad58055ad1491778895b25e21e53909f5c53b4872d60b
2.6 KB
scripts/biohub_esm_lib/esmc.py
SHA-25696cbaa293ba29ecc91ba2b20cfda039d7b42fcb6511b0aa2a694d454e0a977b4
12.4 KB
scripts/biohub_esm_lib/esmc_landscape.py
SHA-256f8114e9620d73e4a524d63202c0bed35596e4c0a49a850389cb1372b0c051cdd
12.1 KB
scripts/biohub_esm_lib/esmc_landscape_jobs.py
SHA-256b683fbc12d4c77f965e1b226e4c63dffcbac2acd542c6ae0e44cd3e44f31286e
16.9 KB
scripts/biohub_esm_lib/http.py
SHA-256ab07dc7e4c815fc7d23095f8e6f86694c1bcbb8f7414341d23f805274f4e2162
71.5 KB
scripts/biohub_esm_lib/managed.py
SHA-256cfb28968202c8790ca25a4a6c322c16bc392629397feb3bccb4b10c06bb890f7
57.4 KB
scripts/biohub_esm_lib/managed_readiness.py
SHA-256f758fad772eab33b1278a48cf1bce71ba445e9065f2816d82cf4b0e8a3221424
12.8 KB
scripts/biohub_esm_lib/modal_jobs.py
SHA-25673aa3593d7334191a839e7c89699618f81318f4e7048d321562a619c7322b4f8
51.2 KB
scripts/biohub_esm_lib/presentation.py
SHA-256aab7572181d14a054eaae909380734db8ba61e71f3a46bd9f60924a039a7a167
8.58 KB
scripts/biohub_esm_lib/provenance.py
SHA-256f23e1be1ebeca7fb5e1b8e7d60923bc7791e581b874fbde2169730f8bf8b0048
66 KB
scripts/biohub_esm_lib/routing.py
SHA-256ad493a583c32abc16bc0471de7ff6fe53c51e279cbe56341d37fcf3698c1374d
9.76 KB
scripts/biohub_esm_lib/security.py
SHA-256b6515ba737b5b105f4b0ced872d72db6390a22ebff2eeed43750347c4297bc5c
29.7 KB
scripts/biohub_esm_lib/starter_examples.py
SHA-256f2ba7af140fba077e425ed8808fd05b385258f82e58d5e74b9ba0fad32b8d14c
68.8 KB
scripts/biohub_esm_lib/validation.py
SHA-256663563ab2e11eb372bf9287e8ea552553d61676bb825c64245dab435aa9c768f
40 KB
scripts/validate_starter_examples.py
SHA-2564e4b27f682d2274151940583b85284d691507a42951351bbbc8091cc0b0e716f
631 Bytes
skills/biohub-esm-setup/SKILL.md
SHA-256a675ca5bf137540917280583c7345fef76c0194faee44c9afb3db2c9f2fa30ef
9.01 KB
skills/biohub-esm-setup/agents/openai.yaml
SHA-25643217309e4c637f94fed1f55e5450a3fe3c45dd4fd7d4dddf0240f7bd157b311
234 Bytes
skills/biohub-esm-setup/references/setup.md
SHA-256305c10cfffde7eb8e37aaa4448a08f6473912b18e9cbb6193794612b50f9715d
6.16 KB
skills/biohub-esm/SKILL.md
SHA-256f934f0041b7b6e43f72958f0b21478f4d8353cd87c2b172eddf6f003904c3e5c
7.45 KB
skills/biohub-esm/agents/openai.yaml
SHA-2565da777f57b70e6ab202e94e56482149f9f385185bd603156a6519f77cef4ed8f
228 Bytes
skills/biohub-esm/references/failures.md
SHA-256c17f6b108d3a2a96925c20c715de4dfaffb3c68a78ee60ed4dda550897916847
3.32 KB
skills/biohub-esm/references/routing.md
SHA-2560a0cfb6373c32cb9ff6fb7f4787e59a4e8f9f49fdf81492f394096bd84a63cbe
5.66 KB
skills/esm-atlas/SKILL.md
SHA-256676fe1f4b487246f68cbf18e1dcdc913ecf8a0e0fa13aee04767ab38e7d7db03
7.59 KB
skills/esm-atlas/agents/openai.yaml
SHA-25609e7df5db6630d6e2fadffbd1d808c1ec9edc85a9dba8668fc0b703a096a8757
207 Bytes
skills/esm-atlas/references/api.md
SHA-25639454f9e6eecd94656a88d64c5018dd9c00151e6b65b81bf6d727f4085a05b67
12.1 KB
skills/esm-atlas/references/bulk-data.md
SHA-256ac463925fcbe69f47d61d8b18fb571bbe62cc70ea7b1b633de32abdf742c3bee
4.23 KB
skills/esmc/SKILL.md
SHA-256958fee332b1700d5afa0dba8ecc97376f4b9122e3ce29015da885a3f2462cf95
8.22 KB
skills/esmc/agents/openai.yaml
SHA-2561ae50788de7b38ebf09bde253b3d70eb2051b819327238150a872fd6c5979bcd
195 Bytes
skills/esmc/references/analysis.md
SHA-256fad54032fbad12c40f72e44e12e3349568ab00a26c27e3dc907991967cc94901
6.07 KB
skills/esmc/references/api.md
SHA-256ee3c30d24d2892c4bc37f9e750133656606dd46e8397738981ed2ca9fe802b58
5.67 KB
skills/esmc/references/self-hosted.md
SHA-2569f4b49b4ef50d2b6cafe83127c2025967c7c17947a18bb737c53d8921988fc1c
1.52 KB
skills/esmfold2-binder-design/SKILL.md
SHA-2564698591e4b9e4e00f42239b4f0704607c50c2c9b708ced9943e69e7f3c11299e
2.3 KB
skills/esmfold2-binder-design/agents/openai.yaml
SHA-25609299d81f7a42950c2cb3c56265da651460420079dd79220d830a30c2d037d9f
217 Bytes
skills/esmfold2-binder-design/references/campaign.md
SHA-2568d82b878d10dd51768e749ce1d227f0ea9f00ad01d8f580084ac86866b55530a
2.08 KB
skills/esmfold2-binder-design/references/modal.md
SHA-25672f63f4f64b9c50cd70fa66e21d8be224073987490dbc10d20767bdf3acf8d3e
7.21 KB
skills/esmfold2/SKILL.md
SHA-256cf96cbfb63752a51105c4a1208b8aeedcec49661b71add7a383c779591993e35
9.08 KB
skills/esmfold2/agents/openai.yaml
SHA-2569ad5b09671cb284420ed553056bfdcb5d14beec161bb92389c8a0ee38d0b1edf
190 Bytes
skills/esmfold2/references/api.md
SHA-256ff15a0d6f4699130298a64dafa8828a191cb7a8fdb7ada990050efd37d606a86
8.44 KB
skills/esmfold2/references/inputs-and-results.md
SHA-25620fbe8fd719dcabc6276c7092bb48a3823a3e2f85cc2ac0dbeb4c71fdad4adc7
4.63 KB
skills/esmfold2/references/self-hosted.md
SHA-2569accfb1af9a2df50495f565bef68497e1c9ca110b3bc06cf619e288249707f88
2.72 KB

Files are archived as data; their code has not been executed. The package does not include private remote service code.