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Scientific Research Codex plugins

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Scientific Research plugins 9

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Molecular Structure ViewerOpenAIQuery, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes.

Plugin name

Molecular Structure Viewer

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4 more matching sources

Publisher subtitle

Visualize and interact with molecular structures in Codex.

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Publisher keywords · listing

structure pdb cif mmcif mol sdf mol2 pqr pdbqt gro xyz molstar protein ligand molecule bioinformatics rendering alignment animation movie png mp4 density trajectory analysis

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Publisher description

Query, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes.

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Publisher full description

Molecular Structure Viewer provides a compact Select, Analyze, Compare, Related data, Style, Animate, and Export workbench over Mol*. Use one revisioned atom-level query and scene contract across the…

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Scientific ResearchVersion 0.1.90
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BoltzBoltzPredict structures, screen molecules and proteins, and design binders.

Publisher subtitle

Predict structures, screen molecules and proteins, and design binders

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Publisher keywords · package

boltz boltz-api go-cli computational-biology protein-design protein-screening small-molecule-design virtual-screening structure-prediction molecular-modeling drug-discovery biotech

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Publisher description

Predict structures, screen molecules and proteins, and design binders.

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Use Boltz from Codex for biomolecular modeling workflows: predict structure and binding for protein, RNA, DNA, and ligand complexes; rank small-molecule or protein libraries against targets; and design novel small molecules, pep…

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Scientific ResearchVersion 0.1.1
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Tamarind BioTamarind BioConnect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300...

Publisher subtitle

Protein and molecular design

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Publisher description

Connect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300+ tools — structure prediction, docking, protein and antibody design, molecular dynamics, and property prediction. Chain tools…

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Scientific ResearchVersion 1.0.0
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NVIDIA BioNeMo Agent ToolkitNVIDIA BioNeMoNVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and b...

Publisher keywords · listing

bionemo life-sciences drug-discovery protein-folding molecular-docking generative-chemistry genomics protein-design cuda-x nim

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Publisher description

NVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and biomarker discovery as ready-to-call tools.

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Scientific ResearchVersion 0.1.0
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Biohub ESMChan Zuckerberg Biohub, Inc.

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…ed protein sequences use the Biohub MCP viewer. Complexes and exact prediction files use a separate molecular viewer when available, with an agent-generated static rendering as a last resort where local rendering tools are available. Managed inference requires a Biohub API key and may incur usage ch…

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Scientific ResearchVersion 0.4.3
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InductiveInductive Bio

Publisher description

…oxicity (ADMET) models predict the chemical and pharmacokinetic properties that determine whether a molecule can become a viable drug. By surfacing these predictions directly in your conversation, scientists can evaluate compounds, triage ideas, and prioritize which molecules to synthesize, without…

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Scientific ResearchVersion 2.0.0
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Rosalind WorkbenchOpenAI

Publisher full description

…orkspace connecting scientific tools for sequencing analysis, evidence synthesis, protein and small-molecule design, structure and sequence analysis, safety and developability, experimental validation, and GPT-Rosalind access.

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Scientific ResearchVersion 0.2.5-research-preview
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RowanRowan Scientific Corporation

Publisher description

…owan in ChatGPT to run and manage computational chemistry and structural biology workflows. Predict molecular properties, search conformers and reaction paths, and calculate energies, structures, spectra, and electronic properties with quantum chemistry. Prepare proteins and run structure prediction…

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Scientific ResearchVersion 1.0.1
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Slide ViewerOpenAI

Publisher full description

…or AnnData sources; navigate image pyramids, compare registered gene expression, inspect cells and molecules, adjust microscopy channels, and edit annotated regions. Use source-backed scientific workflows and single-user projects while preserving the original specimen. UI actions have typed agent c…

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Scientific ResearchVersion 0.1.65
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