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Scientific Research Codex plugins

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Scientific Research plugins 11

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Adaptyv BioOpenAIGrounded workflows for preparing, estimating, submitting, and monitoring protein experiments through Adaptyv Bio's hosted MCP server. Publisher subtitle Plan and manage protein experiments with review gates Show in context → 3 more matching sources Publisher keywords · listing adaptyv-bio life-science protein wet-lab experiments mcp Show in context → Publisher description Grounded workflows for preparing, estimating, submitting, and monitoring protein experiments through Adaptyv Bio's hosted MCP server. Show in context → Publisher full description An OpenAI-authored integration for Adaptyv Bio's hosted MCP server. Estimate and prepare protein experiments, create reviewable drafts, explicitly approve submission and commercial transitions, and monitor status and results without collapsing real-world actions into a single step. Show in context →	Scientific ResearchVersion 0.0.4	View details →
Biohub ESMChan Zuckerberg Biohub, Inc.Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, a... Publisher subtitle Understand proteins with ESM Show in context → 3 more matching sources Publisher keywords · listing biohub esm esmc esmfold2 esm-atlas protein-language-model mutation-landscape sparse-autoencoder multiple-sequence-alignment structure-prediction protein-design computational-biology modal hugging-face Show in context → Publisher description Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, discover relatives, and plan binder workflows. Show in context → Publisher full description Biohub ESM helps you understand proteins from a name, sequence, or file: explore mutation landscapes, interpret what ESMC sees, predict and view all-atom structures, and discover related proteins. It chooses the right ESM workflow,… Show in context →	Scientific ResearchVersion 0.2.4	View details →
Biohub ESMChan Zuckerberg Biohub, Inc.Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, and discover relatives. Publisher subtitle Understand proteins with ESM Show in context → 3 more matching sources Publisher keywords · listing biohub esm esmc esmfold2 esm-atlas protein-language-model mutation-landscape sparse-autoencoder multiple-sequence-alignment structure-prediction computational-biology modal hugging-face Show in context → Publisher description Understand proteins with ESM: explore mutation landscapes, interpret learned features, predict and view structures, and discover relatives. Show in context → Publisher full description Biohub ESM helps you understand proteins from a name, sequence, or file: explore mutation landscapes, interpret what ESMC sees, predict and view all-atom structures, and discover related proteins. It chooses the right ESM workflow,… Show in context →	Scientific ResearchVersion 0.4.3	View details →
BoltzBoltzPredict structures, screen molecules and proteins, and design binders. Publisher subtitle Predict structures, screen molecules and proteins, and design binders Show in context → 3 more matching sources Publisher keywords · package boltz boltz-api go-cli computational-biology protein-design protein-screening small-molecule-design virtual-screening structure-prediction molecular-modeling drug-discovery biotech Show in context → Publisher description Predict structures, screen molecules and proteins, and design binders. Show in context → Publisher full description Use Boltz from Codex for biomolecular modeling workflows: predict structure and binding for protein, RNA, DNA, and ligand complexes; rank small-molecule or protein libraries against targets; and design novel small molecules, peptides, antibodies, nanobodies, or custom protein binders with st… Show in context →	Scientific ResearchVersion 0.1.1	View details →
Tamarind BioTamarind BioConnect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300... Publisher subtitle Protein and molecular design Show in context → 1 more matching sources Publisher description Connect ChatGPT to your Tamarind Bio workspace for protein and molecular science. Validate, estimate, submit, and monitor jobs across 300+ tools — structure prediction, docking, protein and antibody design, molecular dynamics, and property prediction.… Show in context →	Scientific ResearchVersion 1.0.0	View details →
Life Sciences DatabasesOpenAIStructured public life-science database research across genetics, omics, biology, chemistry, structure, and clinical evidence. Publisher keywords · listing life-science databases bioinformatics genetics omics proteins chemistry clinical-research Show in context → 1 more matching sources Publisher full description …red public life-science resources across human genetics, variants, expression, functional genomics, proteins, structures, pathways, chemistry, pharmacology, clinical evidence, and public omics datasets. Use focused skills for source-specific lookups or combine a small set of orthogonal databases for… Show in context →	Scientific ResearchVersion 0.1.5	View details →
Molecular Structure ViewerOpenAIQuery, analyze, compare, style, animate, and render molecular structures with revisioned Mol* scenes. Publisher keywords · listing structure pdb cif mmcif mol sdf mol2 pqr pdbqt gro xyz molstar protein ligand molecule bioinformatics rendering alignment animation movie png mp4 density trajectory analysis Show in context →	Scientific ResearchVersion 0.1.90	View details →
NVIDIA BioNeMo Agent ToolkitNVIDIA BioNeMoNVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and b... Publisher keywords · listing bionemo life-sciences drug-discovery protein-folding molecular-docking generative-chemistry genomics protein-design cuda-x nim Show in context → 2 more matching sources Publisher description NVIDIA BioNeMo agent skills for life sciences — protein folding, molecular docking, generative chemistry, genomics, protein design, and biomarker discovery as ready-to-call tools. Show in context → Publisher full description …s portable agent skills: structure prediction, docking, generative chemistry, genomics, and de novo protein design. The plugin helps an agent pick the right tool, prepare inputs, run it, and interpret outputs. Show in context →	Scientific ResearchVersion 0.1.0	View details →
Seq2MusicJacob Michael VoganOffline biological sequence/music conversion with reversible MIDI, WAV, and MusicXML, accessible score notation, and lossy arbitrary-audi... Publisher keywords · listing bioinformatics sonification protein sequence midi Show in context → 1 more matching sources Publisher full description Seq2Music turns protein, DNA, and RNA sequences into music and score sheets. It can both encode and decode. It can also convert your audio a new protein, DNA, or RNA sequence by matching sounds and notes to sequence… Show in context →	Scientific ResearchVersion 0.3.2	View details →
Rosalind WorkbenchOpenAI Publisher full description A workspace connecting scientific tools for sequencing analysis, evidence synthesis, protein and small-molecule design, structure and sequence analysis, safety and developability, experimental validation, and GPT-Rosalind access. Show in context →	Scientific ResearchVersion 0.2.5-research-preview	View details →
RowanRowan Scientific Corporation Publisher description …calculate energies, structures, spectra, and electronic properties with quantum chemistry. Prepare proteins and run structure prediction, docking, molecular dynamics, and binding affinity workflows. Calculations are saved to Rowan and available in the web app, while existing Rowan work can be viewe… Show in context →	Scientific ResearchVersion 1.0.1	View details →