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Life Sciences NGS AnalysisOpenAIGuided NGS intake, local execution, and public-pipeline routing for BCL, FASTQ, DNA variant, RNA-seq, single-cell, epigenomics, amplicon,...

Publisher keywords · package

ngs sequencing bioinformatics fastq bcl rnaseq scrnaseq variant-calling atacseq chipseq microbiome metagenomics pipeline-routing nextflow nf-core

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Publisher description

Guided NGS intake, local execution, and public-pipeline routing for BCL, FASTQ, DNA variant, RNA-seq, single-cell, epigenomics, amplicon, and metagenomics analyses, with deeper decision skills for high-risk assay branches.

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Publisher full description

…lidation, logs, manifests, QC reports, and artifact indexes. It includes deeper decision skills for BCL demultiplexing, FASTQ QC execution and interpretation, germline, somatic and UMI-panel DNA variants, bulk RNA-seq count generation and differential expression, ATAC-seq, ChIP-seq/CUT&RUN/CUT&Tag,…

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Education & ResearchVersion 1.0.3
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@imqueueMYKHAILO STADNYK

Publisher description

…reaks quietly rather than loudly. scaffold_service generates an idiomatic service — an IMQService subclass with @expose()d, JSDoc-typed methods plus a bootstrap that starts it — from the method signatures you describe. A custom return type comes back with the @classType() and @property() decorators…

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Developer ToolsVersion 3.3.0
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